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Hello!
I'm trying to open a CSV file which I downloaded from Scopus, but an error message "Error while reading VOSviewer map file (line1)": XXX is not a valid column header." pops up. As advised, I removed unnecessary information before downloading the CSV file from Scopus, but the message keeps coming back. I tried several times with less and less information on my CSV file, but still the same with new XXX each time .
How can I resolve this??
Thank you!
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In VOSviewer the the types of analysis options are not active. How can I solve this problem?
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I have uploaded the ris file but I couldn't get all the option of country , citation options
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I cannot see the links between labels on the map. There is no lines part in the interface. can you help me?
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Hello,
I have a problem that I could not solve for a long time. I tried with three different computers (both windows and mac OS). Hope that you can help me about it. After I made a cluster analysis on Vosviewer, I save both map and network files. However, these files do not include the information related to "url". "Url" column exists in the file but it is empty. Therefore, I cannot see the documents' DOI numbers that will enable me to merge with other databases. I am sure that it is not related to the Web of Science data, as DOI numbers exist in WOS data file.
Hope that you can help me,
Nilay
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Dear peter Kokol,
I am using VOSviewer with Scopus it giving error on although i have downloaded papers and saved . The error title is
" While reading Scopus File, cannot find Authors, Keyword ....
I will be glad for your feedback thank you
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Hello,
First thank you for your awesome tool and for making them freely accessible.
I'm trying to make a map using WoS data. Before the new year, I was able to download the full citation and metadata in batches of 500 as recommended in the tutorial. After the new year, I now only have the option for author, title, source, abstract, which seems to severely restrict the types of maps I can generate. I tried from two different university accounts to get the fuller txt files. I also tried the classic version and new beta of the platform. Is this something specific to my universities or is this a change across the web of science? If so, any suggestions for generating maps beyond author co-occurrences (e.g., country/institution/citations) using WoS?
Thank you!
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In the new Web of Science, the export features still seem to be quite limited. Hopefully this will improve soon. However, in the classic Web of Science, it seems that nothing has changed in the export features. My recommendation therefore is to use the classic Web of Science. In addition, make sure to work with the Web of Science Core Collecton, not with All Databases.
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Lauren Maggio,
I have also found this issue today. What i did is, opened my University e-library link and found another link to open web of sciences and it works. I don't know the back side technical details why it works via e-lib link. I just shared my experience may be it works for you. Thank you.
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Hi team,
I have downloded articles metadata from different databases and import all of them into endnote for literature review. After two rounds of data refinement and cleaning unrelated articles, I want to import the final sample into Vosviewer.
However, I have got an error in reading file.
Would you please help me to solve it.
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For those having problems with creating thesaurus files:
• In the map you will often see terms in singular and plural form or with/without a hyphen
(-), etc. You can merge these keywords by using a thesaurus file (in the step Choose type
of analysis and counting method). Create a two-column table in Excel. Name the first
column label and list the keywords you want to delete. Name the second column replace
by and enter the replacement keywords. If you leave the cell in the column ‘replace by’
empty, the keyword in the column ‘label’ will be removed.
Save this file as a text-file (tab delimited). You can upload the file in the step ‘Choose type
of analysis and counting method’.
• If you want to save a picture of the map, click Screenshot on the left side of the screen
and choose Save to File.
• You can adjust the clustering: under Analysis > Clustering the default clustering resolution
is 1.00. When you enlarge the resolution (for example 1.20), you get more clusters. With a
smaller value, you get less clusters.
• You can see the keywords under the tab Items.
• Click Save > Map to download the list of keywords in the map
(Source: https://redesigninginformationliteracyeur.files.wordpress.com/2017/05/iss_scoping_search_development_studies_and_global-south-vosviewer.pdf)
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Hi,
I am facing trouble of presenting the lower case characters to uppercase, at least the first letter of each word I want in upper case in the map. Can you please suggest me how can I correct this problem?
Thanks in advance for your supports.
Bishawjit Mallick
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Hello Team,
I just downloaded VOSviewer but I need your assistance in clearing an error in a .csv file containing data.
This is the error I keep receiving when analysing the data:
'Error while reading Scopus file 'Scopus_exported_refine_values (8).csv' (line 8): Incorrectnumber of columns"
Thanks.
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Unfortunately Scopus CSV files regularly cause problems. This is due to small bugs in the CSV export feature in Scopus. When you export a CSV file from Scopus, you can choose which data elements you want to include in the file. My advice is to try out different choices and to leave out data elements that you don't need (e.g., funding information). By leaving out the right data elements, it is usually possible to circumvent problems with the CSV export feature in Scopus.
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Dear Ludo, i am really very grateful for your answer. See you soon.
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Hi Ludo, sorry for bothering you but I feel the need of a comparison and a comfort: what do you think about coupling and mapping references on the basis of keywords (column DE in a WoS file) and not (or also) on the basis of cited references (column CR)? Thanks for your attention and my best wishes for the upcoming holidays.
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Do you have an R package for VOSviewer? It will be a great hit.
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Hi!
Could you help me with a situation? I am using a thesaurus with the intention of to combine some keywords that have the same meaning, however, I am not successful in the sum of the occurrences with some of these words. For example, I am trying to combine “human - 20 occurrences” with “humans - 17 occurrences”, however replacing “human” with “humans” I get 20 occurrences and not 37. I emphasize that this failure does not occur with so many other words used in the same thesaurus. In these cases, the sum occurs as expected. I appreciate if you can help me.
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Hello, how can I set not to convert to lowercase letters in the process of importing data?
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The conversion from upper case to lower case cannot be turned off. It is necessary because some data sources use upper case and lower case in an inconsistent way. To handle these inconsistencies, VOSviewer converts all upper case characters to lower case when a new map is created.
After you have created a map, you can save the map in a VOSviewer map file. This file can then be edited in a spreadsheet program such as MS Excel. By editing the labels in the 'label' column, you can convert lower case characters to upper case.
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Hi,
is there a video on how to upload the maps online?
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I am afraid there is no such video. By the way, in the near future, we expect to release a web-based version of VOSviewer, which will make it easier to make maps available online.
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like this to aplication
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Ludo
In a document co-citation analysis what is the conceptual difference in the measure of influence between citations and total link strength?
Assume for example that two documents have the same or similar level of citations, but one has much greater link strength. How does one interpret that difference?
Thanks.
Philip
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If two documents have a similar number of citations, but one has a much higher total link strength than the other, this means that the former document is much more strongly connected, through co-citation links, with other documents included in the co-citation network. The latter document has a more peripheral position in the network.
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Dear friends,
First of all, thanks for this increadible tool!
I was wondering if something changed in VOSviewer or in Dimensions last week, because suddenly I started to get the error message: "Error while reading Dimensions file 'name of the file' (line XXX): Incorrect number of columns".
I'm using the same workflow as I always used... Any hint?
Best,
Whaner Endo - University of Sao Paulo (Brazil)
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Hello team,
I got an error window box, it says:
Error while reading VOSviewer map file (line 1): FN ClARIVATE ANALYTICS WEB OF SCIENCE is not a valid column header.
I tried to save the WOS file as plaintext and as tap-delimited (win). also, I tried using the web version of VOSviewer ...got the same error window box!
looking forward to your adivce!
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Hello,
I am working on a set of publications of a university department. In the bibliographic coupling analysis and the co-citation analysis, the same item (e.g. the journal "Nature") in respective visualization ("sources" in the former analysis and "cited sources") shows a different number of citations. Could you explain why? The "documents" and "citations" are the same in the citations analysis and bibliographic coupling analysis.
In addition to finding out the top journals that the researchers have published in, can VOSviewer present the journals that are most-frequently cited in a set of publications?
Thanks for your time!
Jennifer
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In the case of citation analysis and bibliographic coupling analysis, the number of citations is the total number of citations received by a journal in the database that you are working with (e.g., Web of Science or Scopus). In the case of co-citation analysis, the number of citations is the total number of citations received by a journal in the documents provided as input to VOSviewer.
Co-citation analysis enables you to identify the most frequently cited journals in a given set of documents.
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Hi Ludo, I am thankful for the explanation. It's very helpful!
I have a question about the distance between two items in a network. For example, in a co-authorship visualization, how does VOSviewer calculate the distance between two authors? How does it determine clusters?
Thanks in advance!
Jennifer
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could you help me please?
I was trying to make a thesaurus file txt from excel file. I already converted the file but when I clicked next in my VoS suddenly a warning pop-up message occured "column header is empty". I had made label and replace by in the first line of my excel file. what should I then?
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The manual has mentioned that I can clean my dataset to get rid of repeating terms (synonyms) as well as merging terms using a thesaurus file. However the manual did not explain how a VOSviewer thesaurus file is created. I am kindly asking for assistance with steps taken to create the thesaurus file compatible with VOSviewer?
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How do i input bibexcel net file to vosviewer?
Thanks and Regards,
Asha
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Click the 'Create' button on the 'File' tab, choose the option 'Create a map based on network data', go to the 'Pajek' tab, and select your NET file as a Pajek network file.
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Hi! I am trying to use the data available at Semantic Scholar but could not find how to retrieve it as a DOI file.
It seems I must use and Semantic API but I was not able to find the details of how to proceed.
Would you mind to give me some guidance?
Thanks,
Cesar
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Hi! I'm wondering if there is a way to extract the distance between the concepts from the co-occurrence map of a text-based data. Since VOSviewer is supposed to give distance-based graphs, I'd like to have a scale based on which I can tell the relative distance between two concepts. Thank you!
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Hello, i am trying out the newest version 1.6.15, but i find out that it is now missing the choice of analyze the data by citation and co-citation. Is that any way i can active it? Or do i need to find the older version of this app to have those choice?
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You need to make sure that the data provided as input to VOSviewer includes data on references. When working with data exported from Web of Science or Scopus, reference data by default is not included. When exporting data from Web of Science or Scopus, you need to explicitly indicate that reference data should be included. This will enable you to create citation-based maps in VOSviewer.
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Yes, that is my mistake, the RIS file export from mendeley do not include the citation data. Thank you for your response!
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Hi Ludo,
I'm having a similar issue, where co-citation is grayed out, even though I've downloaded the csv from Scopus with the reference data. I've also tried leaving some data out but that still does not work.
Do you have any suggestions?
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Hello. I have an important question. When we formulate a search strategy whatever very precise, it is likely that so many articles will enter to our search results that they are not related to our topic. In the systematic review we assess every single abstract and title, however when we want to work with VOS VIEWER how we can be sure that all included results are exactly related to our purpose of the study? Please guide me. Thank you
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Good day
I am doing a term co-occurrences map based on text data. I am confused about how the link strength is calculated. The occurrence of word A is 35 and the occurrence of word B is 16, and their total link strength is 72. I thought the link is the number of times the two words co-occurred, but word A cannot co-occur with word B 72 times because it only occurred 35 times, and word B only occurred 16 times.
If someone can please assist on how the total link strength is calculated, please.
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Hello,
How can I combine two similar keywords?
For example, there are
absorptive capacity
absorptive-capacity
It is definitely one term.
thank you
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Dear authors,
How can I provide a RefWorks file as input to VOSviewer? Thank you very much,
Mireia
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Yes, RefWorks files are supported (even though they offer only limited possibilities). You need to click the 'Create' button in VOSviewer, you then need to choose the option 'Create a map based on bibliographic data' or 'Create a map based on text data', followed by the option 'Read data from reference manager files', and you then need to go to the 'RefWorks' tab.
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Dear Dr Waltman,
is there a limited number of files (e.g. in plain text) that can be selected to do the mapping?
Best wishes
Bénédicte
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When creating a map based on data from, for instance, Web of Science, Scopus, or Dimensions, it is possible to select multiple files at the same time (using the Control key). VOSviewer will then process all selected files. You don't need to manually merge your files before providing them as input to VOSviewer.
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Hi,
I'm trying to merge the search results from multiple sources including WOS, Scopus, and pubmed.
I was wondering if there is any available format for this or code to merge files.
Thanks,
Yunjin
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Just learned about VOSviewer today. Use a Mac, OS Catalina (10.15.1). Downloaded and extracted the zip file. When i click on VOSviewer.app, this window pops up:
“VOSviewer.app” can’t be opened because Apple cannot check it for malicious software.
This software needs to be updated. Contact the developer for more information."
Any suggestions on how to proceed?
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Hi there,
On my new Windows system VOSviewer doesn't start, saying "This applicatiopn requires a Java Runtime Environment 1.8.0".
Actually, I've installed AdoptOpenJDK with JAVA_HOME and Path variables set properly.
Is there any convenient way to go on without the Oracle Java RE?
Best,
Christian
---
F:>java -version
openjdk version "11.0.8" 2020-07-14
OpenJDK Runtime Environment AdoptOpenJDK (build 11.0.8+10)
OpenJDK 64-Bit Server VM AdoptOpenJDK (build 11.0.8+10, mixed mode)
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Hi there,
On my new Windows system VOSviewer doesn't start, saying "This applicatiopn requires a Java Runtime Environment 1.8.0".
Actually, I've installed AdoptOpenJDK with JAVA_HOME and Path variables set properly.
Is there any convenient way to go on without the Oracle Java RE?
Best,
Christian
---
F:>java -version
openjdk version "11.0.8" 2020-07-14
OpenJDK Runtime Environment AdoptOpenJDK (build 11.0.8+10)
OpenJDK 64-Bit Server VM AdoptOpenJDK (build 11.0.8+10, mixed mode)
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Within a selected dataset, how can I find:
which documents are co-cited and they are co-cited by which other documents so that I can find their co-citation number too. Waiting for your reply.
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Hi Professor Waltman,
Currently the output data contains average citations (per publication) for the analyzed "terms", authors, countries, journals, etc. How can we find out and report the standard deviation (SD) or the median? Thank you.
Best regards,
Andy
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Hi,
I am Mostafa from Monash university. In keywords co-occurrence analysis, in order to make the mapping more meaningful and consistent I have unified the keywords to reflect their associated concept. But there are keywords which don't really convey a concept/topic in my bibliometric analysis. I am wondering if deselection of these keywords may affect the authenticity and correctness of the analyses in VOSviewer?
Thanks,
Kind regards.
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From my point of view, leaving out specific keywords is perfectly fine. Of course, when you report your analysis, you need to explain and justify your choice to leave out certain keywords.
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Hi,
I am Mostafa from Monash university. In keywords co-occurrence analysis, in order to make the mapping more meaningful and consistent I have unified the keywords to reflect their associated concept. But there are keywords which don't really convey a concept/topic in my bibliometric analysis. I am wondering if deselection of these keywords may affect the authenticity and correctness of the analyses in VOSviewer?
Thanks,
Kind regards.
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Dear Professor Waltman,
Would future versions of VOSviewer consider data slicing? It will be much more convenient if we can slice the whole dataset into different time periods, or different publication types, etc. Especially when the dataset is large, it is time-consuming to re-download from WoS based on different filters. Thank you for your consideration.
Best regards,
Andy
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Thanks Andy for this suggestion. This is indeed on our to-do list, although I cannot promise we will be able to implement this in the near future. Please note that there are various data sources, such as Microsoft Academic, which VOSviewer accesses through their API (rather than by processing text files downloaded manually through a web interface). For these data sources VOSviewer already offers possibilities for data slicing.
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Hi,
I have two data sets from scopus, publications in a two different journals in the same field. I'm trying to create a co-authorship network and I stumble in a little issue, same author with different name format. I have for example 'Adelekan M' in one data set and Adelekan M.L. in the other one (same author ID), and therefore producing each one a different co-authorship network. But if I try to modify the .cvs file, deleting or adding a character I get the:
I0Exception reading next record: java.io.I0Exception: (line 2) invalid char between encapsulated token and delimeter
any advice on how to get around this?
cheers,
Javier
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Modifying Scopus CSV files is possible in principle, but usually causes all kinds of problems in practice. There is an easier solution to your problem, which is to use a so-called thesaurus file. See the VOSviewer manual for more information about thesaurus files.
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I am new to VOSViewer and my attempts to download it on to my pc has not been successful. I am using a Mac running on MacOS Catalina.
I've followed Nees' guide on how to install it but it is still not working. Any assistance, please?
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Hi, I try to combine two .cvs extracted from scopus, each one works fine, but as soon as I combine I get the I0Exception reading next record: java.io.I0Exception: (line 2) invalid char between encapsulated token and delimeter
I have tried with really simple searches and complex ones, and each file works fine, but as soon as I try to merge two of them the error pops up.
Thanks,
Javier
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Hi!
I would like to know if the program allows to create a network with the data from two different databases.
For example: to create a network about the kyewords/terms from WoS and Scopus in the same graphic. Is it possible? I have checked the manual and the tutorial video and I could not find this information.
I really apreciate your help and time.
Kind regards,
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Dear Prof. Nees and Prof. Ludo
Good Day ! I have recently started working on VOSviewer and just loving it.
However, I am facing a problem that; all of the types of analysis are not enabled in the software in my system.
For example:
Co-authorship; Co-occurrence are enabled
Citation; Bibliographic coupling; Co-citation are not enabled. I cannot use these three types.
Kindly extend your esteemed guidance to solve this issue.
Regards
Pavitra Dhamija
Post Doc
University of Johannesburg
South Africa
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When exporting data from Web of Science or Scopus, you need to make sure to include data on the references of publications. To do so, follow the instructions on p. 27 in the VOSviewer manual. I expect this will solve your problem.
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I want to use the term viewer to analyze my WOS results in a few ways. I've made a nice term map from the results from a rather 'complicated' WOS search. I would like to be able to select terms in the viewed map and see the articles that are associated with that term. Is there a way to do this?
Then I want to analyze two subsets of WOS datasets - one subset includes the articles that have passed my criteria for title and abstract; the second subset are those that fail. My goal is to identify if there are patterns in the search terms that led to an article passing vs failing.
It seems like VOSviewer has this association but is hidden away . In the bibliographic maps, the articles can be seen. Your help is much appreciated!
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Getting the relations between terms and documents is possible in VOSviewer, but this feature is somewhat hidden. In the final step of the 'Create Map' wizard, a table is presented listing the terms to be included in your map. When you right-click on this table, a context menu will appear that offers an option for exporting the document-term relations to a text file. There is also an option for exporting the terms to a text file. Combined with the original WoS file that was provided as input, this provides all data needed to determine which terms occur in which documents. To further analyze the data, you probably need to use a spreadsheet program or a tool like R or Python.
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When I open a .net file by Pajek, then I use the "VOS Mapping" function of Layout, the application tell me that"VOS Mapping cannot be applied to disconnected networks." What should I do to solve this problem? I'm looking forward for your replay, and thanks very much for your help.
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I have opened a .net file by Pajek, then I used the "VOS Mapping" function of Layout, but the software told me that "VOS Mapping cannot be applied to disconnected networks." What should I do to solve this problem? I'm looking fordward to your replay, and thanks very much for your kindly help.
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